RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01740.1 View Network Show in Genome Browser |
| Other Names | Os04g0107900 |
| Description | heat shock protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 483241-486065 Nucleotide Length: 2112 |
| Protein-coding | LOC_Os04g01740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g43020 LOC_Os03g16860 LOC_Os01g62290 LOC_Os03g60620 LOC_Os02g32030 LOC_Os03g16920 LOC_Os03g44620 LOC_Os03g56460 LOC_Os01g53900 LOC_Os02g52360 LOC_Os03g51140 More.. |
| Downstream Genes | LOC_Os04g45480 LOC_Os05g38530 LOC_Os09g30418 LOC_Os09g30412 LOC_Os08g39140 LOC_Os05g48810 LOC_Os08g36150 LOC_Os11g47760 LOC_Os04g02820 LOC_Os06g11320 LOC_Os06g14510 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01740.1 |
| Rice Genome Annotation | LOC_Os04g01740.1 |
| Ricechip | LOC_Os04g01740.1 |
| KEGG | osa:9267997 dosa:Os04t0107900-02 |
| Entrez-Gene | 9267997 |