RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g01780.1 View Network Show in Genome Browser |
| Other Names | Os04g0108300 |
| Description | uncharacterized ACR, COG1399 family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 498116-501013 Nucleotide Length: 957 |
| Protein-coding | LOC_Os04g01780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g38740 LOC_Os03g52640 LOC_Os03g63930 LOC_Os03g02970 LOC_Os02g30060 LOC_Os01g68120 LOC_Os02g10320 LOC_Os03g39860 LOC_Os03g22950 LOC_Os01g72800 LOC_Os03g18590 More.. |
| Downstream Genes | LOC_Os09g14610 LOC_Os09g36860 LOC_Os12g34890 LOC_Os11g31900 LOC_Os08g43580 LOC_Os09g33460 LOC_Os05g18850 LOC_Os04g30760 LOC_Os12g13930 LOC_Os07g12150 LOC_Os06g25250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g01780.1 |
| Rice Genome Annotation | LOC_Os04g01780.1 |
| Ricechip | LOC_Os04g01780.1 |
| KEGG | dosa:Os04t0108300-01 |