RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g02000.1 View Network Show in Genome Browser |
| Other Names | Os04g0110600 |
| Description | zinc finger family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 617482-622877 Nucleotide Length: 1032 |
| Protein-coding | LOC_Os04g02000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59500 LOC_Os01g69970 LOC_Os03g61560 LOC_Os03g22320 LOC_Os02g12600 LOC_Os03g18410 LOC_Os03g22350 LOC_Os03g05720 LOC_Os03g58340 LOC_Os03g36930 LOC_Os01g45190 More.. |
| Downstream Genes | LOC_Os06g43690 LOC_Os05g49230 LOC_Os04g50660 LOC_Os07g20580 LOC_Os11g01420 LOC_Os12g01430 LOC_Os07g40930 LOC_Os05g02400 LOC_Os04g43140 LOC_Os09g18320 LOC_Os07g33340 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g02000.1 |
| Rice Genome Annotation | LOC_Os04g02000.1 |
| Ricechip | LOC_Os04g02000.1 |
| KEGG | osa:4334930 dosa:Os04t0110600-01 |
| Entrez-Gene | 4334930 |