RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g02150.1 View Network Show in Genome Browser |
| Other Names | Os04g0112300 |
| Description | tRNA methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 715761-722261 Nucleotide Length: 1518 |
| Protein-coding | LOC_Os04g02150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g54110 LOC_Os02g50370 LOC_Os03g05720 LOC_Os03g02110 LOC_Os03g58810 LOC_Os03g52470 LOC_Os01g43020 LOC_Os01g58220 LOC_Os03g22320 LOC_Os03g60930 LOC_Os03g02420 More.. |
| Downstream Genes | LOC_Os04g25360 LOC_Os04g25990 LOC_Os09g18320 LOC_Os12g03822 LOC_Os11g03990 LOC_Os07g33340 LOC_Os04g58830 LOC_Os11g19250 LOC_Os04g56670 LOC_Os04g54820 LOC_Os08g12820 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g02150.1 |
| Rice Genome Annotation | LOC_Os04g02150.1 |
| Ricechip | LOC_Os04g02150.1 |
| KEGG | osa:4334938 dosa:Os04t0112300-01 |
| Entrez-Gene | 4334938 |