RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
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Locus Name | LOC_Os04g02820.1 View Network Show in Genome Browser |
Other Names | Os04g0118400 |
Description | elongation factor, putative, expressed |
Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 1093337-1098664 Nucleotide Length: 2532 |
Protein-coding | LOC_Os04g02820 |
Gene Ontology Classification | ||||
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GO | Name | Type | Code | |
GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
GO:0006950 | response to stress | Biological Process | IEA | |
GO:0006412 | translation | Biological Process | IEA | |
GO:0005488 | binding | Molecular Function | IEA | |
GO:0008135 | translation factor activity, nucleic acid binding | Molecular Function | IEA | |
GO:0005575 | cellular_component | Cellular Component | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0016020 | membrane | Cellular Component | IEA | |
GO:0005730 | nucleolus | Cellular Component | IEA | |
GO:0005886 | plasma membrane | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0005773 | vacuole | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
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Upstream Genes | LOC_Os02g05330 LOC_Os03g58430 LOC_Os03g08020 LOC_Os03g08050 LOC_Os03g08010 LOC_Os02g12800 LOC_Os02g47140 LOC_Os02g12794 LOC_Os02g54470 LOC_Os03g08440 LOC_Os01g67134 More.. |
Downstream Genes | LOC_Os08g03640 LOC_Os11g04070 LOC_Os12g03880 LOC_Os06g04270 LOC_Os11g11390 LOC_Os06g48750 LOC_Os07g08330 LOC_Os07g42450 LOC_Os08g13690 LOC_Os12g38000 LOC_Os07g08660 More.. |
Pathways | |
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KEGG Pathways | rn00230 |
Database Links | |
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Gramene | LOC_Os04g02820.1 |
Rice Genome Annotation | LOC_Os04g02820.1 |
Ricechip | LOC_Os04g02820.1 |
KEGG | osa:4334959 dosa:Os04t0118400-01 |
Entrez-Gene | 4334959 |