RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g03870.1 View Network Show in Genome Browser |
| Other Names | Os04g0128001 |
| Description | cytochrome P450, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 1767007-1768449 Nucleotide Length: 1443 |
| Protein-coding | LOC_Os04g03870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0019825 | oxygen binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g57290 LOC_Os02g44654 LOC_Os01g08800 LOC_Os01g43740 LOC_Os01g41820 LOC_Os01g41810 LOC_Os03g04640 LOC_Os03g25490 |
| Downstream Genes | LOC_Os04g48460 LOC_Os06g03930 LOC_Os10g38120 LOC_Os04g47250 LOC_Os08g16260 LOC_Os10g34480 LOC_Os11g29290 LOC_Os05g33600 LOC_Os06g09220 LOC_Os06g09210 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g03870.1 |
| Rice Genome Annotation | LOC_Os04g03870.1 |
| Ricechip | LOC_Os04g03870.1 |
| KEGG | dosa:Os04t0128001-00 |