RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g04254.2 View Network Show in Genome Browser |
| Other Names | Os04g0131900 |
| Description | sterol 3-beta-glucosyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 1985638-1997936 Nucleotide Length: 1761 |
| Protein-coding | LOC_Os04g04254 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33230 LOC_Os01g54540 LOC_Os03g03360 LOC_Os01g62210 LOC_Os01g40250 LOC_Os03g60130 LOC_Os03g10930 LOC_Os02g39280 LOC_Os03g06350 LOC_Os03g54040 LOC_Os03g24020 More.. |
| Downstream Genes | LOC_Os09g34130 LOC_Os08g25010 LOC_Os05g38580 LOC_Os06g03790 LOC_Os08g31228 LOC_Os09g19954 LOC_Os08g31219 LOC_Os04g25540 LOC_Os06g04450 LOC_Os08g21840 LOC_Os04g51770 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g04254.2 |
| Rice Genome Annotation | LOC_Os04g04254.2 |
| Ricechip | LOC_Os04g04254.2 |
| KEGG | osa:4335001 dosa:Os04t0131900-01 |
| Entrez-Gene | 4335001 |