RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g08320.1 View Network Show in Genome Browser |
| Other Names | Os04g0165400 |
| Description | YIF1B, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 4441881-4444004 Nucleotide Length: 843 |
| Protein-coding | LOC_Os04g08320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17990 LOC_Os03g09140 LOC_Os01g42480 LOC_Os03g46390 LOC_Os01g64760 LOC_Os01g12730 LOC_Os02g02720 LOC_Os01g37800 LOC_Os03g60530 LOC_Os01g52780 LOC_Os02g51290 More.. |
| Downstream Genes | LOC_Os07g09680 LOC_Os07g31370 LOC_Os05g38180 LOC_Os05g36150 LOC_Os08g17600 LOC_Os12g43550 LOC_Os05g44050 LOC_Os07g13530 LOC_Os06g35814 LOC_Os05g38630 LOC_Os06g25439 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2919 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g08320.1 |
| Rice Genome Annotation | LOC_Os04g08320.1 |
| Ricechip | LOC_Os04g08320.1 |
| KEGG | osa:4335045 dosa:Os04t0165400-01 |
| Entrez-Gene | 4335045 |