RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g08340.1 View Network Show in Genome Browser |
| Other Names | Os04g0165600 |
| Description | OsSigP3 - Putative Type I Signal Peptidase homologue; employs a putative Ser/Lys catalytic dyad, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 4452696-4455350 Nucleotide Length: 495 |
| Protein-coding | LOC_Os04g08340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17590 LOC_Os02g58139 LOC_Os01g27730 LOC_Os03g02970 LOC_Os01g63980 LOC_Os02g02510 LOC_Os03g38740 LOC_Os02g11030 LOC_Os04g08290 LOC_Os02g32400 LOC_Os01g68120 More.. |
| Downstream Genes | LOC_Os05g23260 LOC_Os06g16260 LOC_Os11g40500 LOC_Os08g41730 LOC_Os09g32800 LOC_Os04g55500 LOC_Os09g13680 LOC_Os06g40960 LOC_Os08g39390 LOC_Os05g24160 LOC_Os09g10980 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g08340.1 |
| Rice Genome Annotation | LOC_Os04g08340.1 |
| Ricechip | LOC_Os04g08340.1 |
| KEGG | osa:4335047 dosa:Os04t0165600-01 |
| Entrez-Gene | 4335047 |