RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g08828.1 View Network Show in Genome Browser
Other Names	Os04g0171800
Description	cytochrome P450, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 4874374-4878345 Nucleotide Length: 1653
Protein-coding	LOC_Os04g08828

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0019748	secondary metabolic process	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003674	molecular_function	Molecular Function	IEA
GO:0019825	oxygen binding	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g44510 LOC_Os02g08180 LOC_Os01g14100 LOC_Os02g38230 LOC_Os03g15770 LOC_Os03g06200 LOC_Os01g63580 LOC_Os01g29150 LOC_Os01g63930 LOC_Os03g03450 LOC_Os02g38290 More..
Downstream Genes	LOC_Os04g09430 LOC_Os08g04180 LOC_Os10g33630 LOC_Os09g27830 LOC_Os04g48380 LOC_Os04g48460 LOC_Os08g17680 LOC_Os08g16260 LOC_Os06g05740 LOC_Os06g03930 LOC_Os07g08430 More..

miRNA Regulations
miRNAs	osa-miR812o-5p

Database Links
Gramene	LOC_Os04g08828.1
Rice Genome Annotation	LOC_Os04g08828.1
Ricechip	LOC_Os04g08828.1
KEGG	osa:4335063 dosa:Os04t0171800-01
Entrez-Gene	4335063