RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g09530.1 View Network Show in Genome Browser |
| Other Names | Os04g0174800 |
| Description | pentatricopeptide, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 5111680-5113716 Nucleotide Length: 900 |
| Protein-coding | LOC_Os04g09530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48920 |
| Downstream Genes | LOC_Os06g08770 LOC_Os04g41140 LOC_Os12g32240 LOC_Os07g38230 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g09530.1 |
| Rice Genome Annotation | LOC_Os04g09530.1 |
| Ricechip | LOC_Os04g09530.1 |
| KEGG | osa:4335071 dosa:Os04t0174800-01 |
| Entrez-Gene | 4335071 |