RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g09720.1 View Network Show in Genome Browser |
| Other Names | Os04g0176400 |
| Description | OsSCP22 - Putative Serine Carboxypeptidase homologue, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 5207942-5216580 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os04g09720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68480 LOC_Os01g39830 LOC_Os01g05080 LOC_Os01g37630 LOC_Os03g14040 LOC_Os01g28540 LOC_Os01g69060 LOC_Os03g62780 LOC_Os01g25360 LOC_Os03g50810 LOC_Os03g63950 More.. |
| Downstream Genes | LOC_Os12g29760 LOC_Os09g26810 LOC_Os07g39280 LOC_Os09g25900 LOC_Os09g34140 LOC_Os07g30670 LOC_Os09g15340 LOC_Os12g38810 LOC_Os06g08670 LOC_Os06g40640 LOC_Os05g01950 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g09720.1 |
| Rice Genome Annotation | LOC_Os04g09720.1 |
| Ricechip | LOC_Os04g09720.1 |
| KEGG | osa:4335083 dosa:Os04t0176400-00 |
| Entrez-Gene | 4335083 |