RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g10380.1 View Network Show in Genome Browser |
| Other Names | Os04g0182701,Os04g0182600,Os04g0182650 |
| Description | glycine-rich protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 5608740-5630277 Nucleotide Length: 4311 |
| Protein-coding | LOC_Os04g10380 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g18890 LOC_Os01g55360 LOC_Os02g48560 LOC_Os02g44870 LOC_Os02g55610 LOC_Os03g18870 LOC_Os02g41550 LOC_Os02g10190 LOC_Os02g45450 LOC_Os03g41080 LOC_Os02g24430 More.. |
| Downstream Genes | LOC_Os05g49170 LOC_Os06g42850 LOC_Os06g30310 LOC_Os06g44190 LOC_Os04g58330 LOC_Os08g16130 LOC_Os04g48350 LOC_Os10g34710 LOC_Os04g32150 LOC_Os09g25090 LOC_Os07g43390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2118e osa-miR2118r osa-miR5791 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g10380.1 |
| Rice Genome Annotation | LOC_Os04g10380.1 |
| Ricechip | LOC_Os04g10380.1 |
| KEGG | osa:4335101 dosa:Os04t0182600-00dosa:Os04t0182650-00 |