RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g10460.1 View Network Show in Genome Browser |
| Other Names | Os04g0183500 |
| Description | amidase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 5686452-5689491 Nucleotide Length: 1512 |
| Protein-coding | LOC_Os04g10460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44820 LOC_Os04g02780 LOC_Os03g50010 LOC_Os04g02754 LOC_Os02g51810 |
| Downstream Genes | LOC_Os11g34210 LOC_Os08g04280 |
| Pathways | |
|---|---|
| Metacyc Pathways | P345-PWY PWY6666-1 P344-PWY PWY-3161 PWY-5025 ARGDEG-V-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g10460.1 |
| Rice Genome Annotation | LOC_Os04g10460.1 |
| Ricechip | LOC_Os04g10460.1 |
| KEGG | osa:4335106 dosa:Os04t0183500-01 |
| Entrez-Gene | 4335106 |