RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g14570.1 View Network Show in Genome Browser |
| Other Names | |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 8166743-8171255 Nucleotide Length: 4032 |
| Protein-coding | LOC_Os04g14570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g46600 LOC_Os02g11980 LOC_Os02g01800 LOC_Os02g11930 LOC_Os02g12030 LOC_Os02g12010 LOC_Os02g12450 LOC_Os02g40180 LOC_Os01g05640 LOC_Os02g13780 LOC_Os01g05940 More.. |
| Downstream Genes | LOC_Os08g09640 LOC_Os06g38730 LOC_Os06g38930 LOC_Os06g38670 LOC_Os08g09450 LOC_Os06g38650 LOC_Os06g38590 LOC_Os06g38780 LOC_Os06g38340 LOC_Os11g41100 LOC_Os11g36090 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g14570.1 |
| Rice Genome Annotation | LOC_Os04g14570.1 |
| Ricechip | LOC_Os04g14570.1 |