RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g14760.1 View Network Show in Genome Browser |
| Other Names | Os04g0224600 |
| Description | phosphoglycerate mutase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 8280282-8285271 Nucleotide Length: 711 |
| Protein-coding | LOC_Os04g14760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g01230 LOC_Os02g51590 LOC_Os03g01180 LOC_Os02g55770 LOC_Os02g55720 LOC_Os02g55710 LOC_Os02g55670 LOC_Os02g55640 LOC_Os01g04910 |
| Downstream Genes | LOC_Os11g31880 LOC_Os09g11510 LOC_Os11g05260 LOC_Os08g37140 LOC_Os05g04960 LOC_Os05g07130 LOC_Os06g50880 LOC_Os10g08940 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g14760.1 |
| Rice Genome Annotation | LOC_Os04g14760.1 |
| Ricechip | LOC_Os04g14760.1 |
| KEGG | osa:4335209 dosa:Os04t0224600-01 |
| Entrez-Gene | 4335209 |