RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g14790.1 View Network Show in Genome Browser |
| Other Names | Os04g0225001,Os04g0224900 |
| Description | FAD dependent oxidoreductase domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 8307223-8314255 Nucleotide Length: 1890 |
| Protein-coding | LOC_Os04g14790 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g74000 LOC_Os01g18320 LOC_Os01g59490 LOC_Os01g67860 LOC_Os02g37010 LOC_Os01g58380 LOC_Os03g06740 LOC_Os01g21380 LOC_Os02g56850 LOC_Os02g07760 LOC_Os01g62420 More.. |
| Downstream Genes | LOC_Os04g55410 LOC_Os05g26660 LOC_Os06g02550 LOC_Os06g47000 LOC_Os07g06080 LOC_Os06g08300 LOC_Os06g40640 LOC_Os07g02130 LOC_Os05g33380 LOC_Os07g04240 LOC_Os10g08022 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00564 |
| Metacyc Pathways | PWY-4261 AERESPDON-PWY ANARESPDON-PWY PWY0-381 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g14790.1 |
| Rice Genome Annotation | LOC_Os04g14790.1 |
| Ricechip | LOC_Os04g14790.1 |
| KEGG | osa:4335210 dosa:Os04t0225001-00dosa:Os04t0224900-01 |