RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g15690.1 View Network Show in Genome Browser |
| Other Names | Os04g0227500 |
| Description | DSBA-like thioredoxin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 8528512-8533183 Nucleotide Length: 681 |
| Protein-coding | LOC_Os04g15690 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g53240 LOC_Os01g72950 LOC_Os02g48560 LOC_Os02g51290 LOC_Os02g44870 LOC_Os03g32270 LOC_Os01g48300 LOC_Os01g35050 LOC_Os03g63660 LOC_Os01g64930 LOC_Os03g41080 More.. |
| Downstream Genes | LOC_Os06g12220 LOC_Os12g37650 LOC_Os05g02060 LOC_Os05g49170 LOC_Os06g42850 LOC_Os12g24580 LOC_Os11g47730 LOC_Os10g22590 LOC_Os07g40620 LOC_Os10g35180 LOC_Os04g52390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g15690.1 |
| Rice Genome Annotation | LOC_Os04g15690.1 |
| Ricechip | LOC_Os04g15690.1 |
| KEGG | osa:4335218 dosa:Os04t0227500-01 |
| Entrez-Gene | 4335218 |