RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g15840.1 View Network Show in Genome Browser |
| Other Names | Os04g0228400 |
| Description | expansin precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 8599011-8600299 Nucleotide Length: 786 |
| Protein-coding | LOC_Os04g15840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g02939 LOC_Os01g42520 LOC_Os01g56330 LOC_Os01g13320 |
| Downstream Genes | LOC_Os09g29710 LOC_Os09g29690 LOC_Os08g39550 LOC_Os05g01970 LOC_Os07g01440 LOC_Os07g36430 |
| Reference | |
|---|---|
| PubMed | 12428004 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g15840.1 |
| Rice Genome Annotation | LOC_Os04g15840.1 |
| Ricechip | LOC_Os04g15840.1 |
| KEGG | osa:4335222 dosa:Os04t0228400-01 |
| Entrez-Gene | 4335222 |