RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g16680.1 View Network Show in Genome Browser |
| Other Names | Os04g0234600 |
| Description | fructose-1,6-bisphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 9075139-9077888 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os04g16680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g09220 LOC_Os01g31690 LOC_Os02g47020 LOC_Os02g01340 LOC_Os03g03720 LOC_Os01g64960 LOC_Os02g58790 LOC_Os01g45274 LOC_Os03g03860 LOC_Os03g55720 LOC_Os02g49680 More.. |
| Downstream Genes | LOC_Os06g15400 LOC_Os11g07020 LOC_Os11g47970 LOC_Os12g19381 LOC_Os12g19470 LOC_Os12g07210 LOC_Os07g05480 LOC_Os08g33820 LOC_Os07g37550 LOC_Os08g10020 LOC_Os07g37240 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00710 rn01100 rn01120 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g16680.1 |
| Rice Genome Annotation | LOC_Os04g16680.1 |
| Ricechip | LOC_Os04g16680.1 |
| KEGG | osa:4335227 dosa:Os04t0234600-01 |
| Entrez-Gene | 4335227 |