RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g18200.1 View Network Show in Genome Browser |
| Other Names | Os04g0254000 |
| Description | dihydrodipicolinate synthase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 10061764-10065209 Nucleotide Length: 1143 |
| Protein-coding | LOC_Os04g18200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g67134 LOC_Os02g32030 LOC_Os02g24020 LOC_Os03g55280 LOC_Os01g59990 LOC_Os04g02820 LOC_Os03g14120 LOC_Os03g22880 LOC_Os02g27760 LOC_Os02g57590 LOC_Os02g33610 More.. |
| Downstream Genes | LOC_Os08g03640 LOC_Os04g23820 LOC_Os10g32550 LOC_Os05g40820 LOC_Os11g04070 LOC_Os12g03880 LOC_Os04g42270 LOC_Os04g51630 LOC_Os07g42450 LOC_Os05g08360 LOC_Os06g09610 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g18200.1 |
| Rice Genome Annotation | LOC_Os04g18200.1 |
| Ricechip | LOC_Os04g18200.1 |
| KEGG | osa:4335317 dosa:Os04t0254000-01 |
| Entrez-Gene | 4335317 |