RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g20990.1 View Network Show in Genome Browser |
| Other Names | Os04g0278900 |
| Description | tRNA-dihydrouridine synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 11801164-11814990 Nucleotide Length: 1314 |
| Protein-coding | LOC_Os04g20990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g02730 LOC_Os02g56040 LOC_Os03g43420 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-5098 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g20990.1 |
| Rice Genome Annotation | LOC_Os04g20990.1 |
| Ricechip | LOC_Os04g20990.1 |
| KEGG | osa:4335364 dosa:Os04t0278900-02 |
| Entrez-Gene | 4335364 |