RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g21110.1 View Network Show in Genome Browser |
| Other Names | Os04g0280200 |
| Description | phosphoribulokinase/Uridine kinase family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 11869125-11887514 Nucleotide Length: 2661 |
| Protein-coding | LOC_Os04g21110 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g17320 |
| Downstream Genes | LOC_Os09g32820 LOC_Os08g41790 LOC_Os11g16370 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | P1-PWY PWY0-163 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g21110.1 |
| Rice Genome Annotation | LOC_Os04g21110.1 |
| Ricechip | LOC_Os04g21110.1 |
| KEGG | dosa:Os04t0280200-01 |