RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g21660.1 View Network Show in Genome Browser |
| Other Names | Os04g0284600 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 12252480-12258695 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os04g21660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g16670 LOC_Os03g62370 LOC_Os03g19990 LOC_Os01g28690 |
| Downstream Genes | LOC_Os07g44410 LOC_Os07g42632 LOC_Os07g09720 LOC_Os06g47830 LOC_Os06g39240 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g21660.1 |
| Rice Genome Annotation | LOC_Os04g21660.1 |
| Ricechip | LOC_Os04g21660.1 |
| KEGG | osa:4335380 dosa:Os04t0284600-01 |
| Entrez-Gene | 4335380 |