RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g21950.1 View Network Show in Genome Browser |
| Other Names | Os04g0287400 |
| Description | WRKY51, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 12425564-12427457 Nucleotide Length: 981 |
| Protein-coding | LOC_Os04g21950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g44380 LOC_Os03g58010 LOC_Os02g50570 LOC_Os01g66270 LOC_Os03g50280 |
| Downstream Genes | LOC_Os09g37080 LOC_Os12g42280 LOC_Os07g48280 |
| Reference | |
|---|---|
| PubMed | 15047897 15618416 21763543 16623886 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g21950.1 |
| Rice Genome Annotation | LOC_Os04g21950.1 |
| Ricechip | LOC_Os04g21950.1 |
| KEGG | osa:4335388 dosa:Os04t0287400-01 |
| Entrez-Gene | 4335388 |