RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g22390.1 View Network Show in Genome Browser |
| Other Names | Os04g0291100 |
| Description | short chain dehydrogenase/reductase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 12669800-12673950 Nucleotide Length: 945 |
| Protein-coding | LOC_Os04g22390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g38440 LOC_Os01g53680 LOC_Os02g30060 LOC_Os01g09570 LOC_Os02g30714 LOC_Os03g62590 LOC_Os02g30690 LOC_Os03g16210 LOC_Os04g02620 LOC_Os04g10010 LOC_Os03g18740 More.. |
| Downstream Genes | LOC_Os04g40730 LOC_Os04g52400 LOC_Os12g43740 LOC_Os04g30760 LOC_Os11g24484 LOC_Os12g27830 LOC_Os04g38420 LOC_Os05g44922 LOC_Os12g13930 LOC_Os09g04730 LOC_Os09g37280 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | ENTBACSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g22390.1 |
| Rice Genome Annotation | LOC_Os04g22390.1 |
| Ricechip | LOC_Os04g22390.1 |
| KEGG | osa:4335398 dosa:Os04t0291100-01 |
| Entrez-Gene | 4335398 |