RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g23420.1 View Network Show in Genome Browser |
| Other Names | |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 13388788-13389357 Nucleotide Length: 570 |
| Protein-coding | LOC_Os04g23420 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g10070 LOC_Os03g09820 LOC_Os03g18410 LOC_Os03g08280 LOC_Os03g05980 LOC_Os02g06700 LOC_Os03g45410 LOC_Os02g04100 LOC_Os01g39630 LOC_Os03g22740 LOC_Os03g22730 More.. |
| Downstream Genes | LOC_Os08g43540 LOC_Os09g36710 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os05g47480 LOC_Os07g47860 LOC_Os10g27174 LOC_Os04g56670 LOC_Os04g41490 LOC_Os12g39070 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g23420.1 |
| Rice Genome Annotation | LOC_Os04g23420.1 |
| Ricechip | LOC_Os04g23420.1 |