RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g23830.1 View Network Show in Genome Browser |
| Other Names | Os04g0303950 |
| Description | exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 13611018-13616050 Nucleotide Length: 645 |
| Protein-coding | LOC_Os04g23830 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01216 LOC_Os01g72940 LOC_Os02g45650 LOC_Os03g18940 LOC_Os01g17279 LOC_Os01g72880 LOC_Os01g43080 LOC_Os01g46380 LOC_Os01g39260 LOC_Os01g39250 LOC_Os02g37920 More.. |
| Downstream Genes | LOC_Os04g31270 LOC_Os12g08740 LOC_Os08g28980 LOC_Os09g37930 LOC_Os04g53200 LOC_Os11g32290 LOC_Os11g17610 LOC_Os05g49800 LOC_Os11g38020 LOC_Os06g51350 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g23830.1 |
| Rice Genome Annotation | LOC_Os04g23830.1 |
| Ricechip | LOC_Os04g23830.1 |
| KEGG | osa:9270337 dosa:Os04t0303950-01 |
| Entrez-Gene | 9270337 |