RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g24140.1 View Network Show in Genome Browser
Other Names	Os04g0306400
Description	ribose-5-phosphate isomerase A, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 13802276-13803543 Nucleotide Length: 828
Protein-coding	LOC_Os04g24140

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g03540 LOC_Os04g19740 LOC_Os02g56850 LOC_Os03g06740 LOC_Os03g49210 LOC_Os04g13470 LOC_Os03g27230 LOC_Os02g37870 LOC_Os02g57150 LOC_Os02g57590 LOC_Os02g26850 More..
Downstream Genes	LOC_Os06g04270 LOC_Os06g02144 LOC_Os09g20640 LOC_Os09g06230 LOC_Os10g28000 LOC_Os11g29400 LOC_Os06g20390 LOC_Os06g41360 LOC_Os12g03822 LOC_Os11g03990 LOC_Os09g32810 More..

Pathways
KEGG Pathways	rn00030 rn00710 rn01100 rn01110 rn01120
Metacyc Pathways	P124-PWY NONOXIPENT-PWY CALVIN-PWY

Database Links
Gramene	LOC_Os04g24140.1
Rice Genome Annotation	LOC_Os04g24140.1
Ricechip	LOC_Os04g24140.1
KEGG	osa:4335430 dosa:Os04t0306400-01
Entrez-Gene	4335430