RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g24430.1 View Network Show in Genome Browser |
| Other Names | Os04g0309600 |
| Description | sucrose synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 14008245-14013440 Nucleotide Length: 2568 |
| Protein-coding | LOC_Os04g24430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g17650 LOC_Os01g46430 LOC_Os03g11560 LOC_Os03g08300 LOC_Os01g43380 LOC_Os01g69060 |
| Downstream Genes | LOC_Os08g34640 LOC_Os12g39340 LOC_Os09g12530 LOC_Os04g34000 LOC_Os05g05270 LOC_Os08g30590 LOC_Os08g34650 LOC_Os06g43630 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00500 rn01100 |
| Metacyc Pathways | PWY-3821 PWY-621 PWY-3801 SUCSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g24430.1 |
| Rice Genome Annotation | LOC_Os04g24430.1 |
| Ricechip | LOC_Os04g24430.1 |
| KEGG | osa:4335447 dosa:Os04t0309600-01 |
| Entrez-Gene | 4335447 |