RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g25990.1 View Network Show in Genome Browser |
| Other Names | Os04g0326300 |
| Description | tRNA methyltransferase complex GCD14 subunit, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 15122939-15126278 Nucleotide Length: 981 |
| Protein-coding | LOC_Os04g25990 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g02150 LOC_Os01g34200 LOC_Os03g52470 LOC_Os02g56020 LOC_Os04g02000 LOC_Os01g49250 LOC_Os03g02420 LOC_Os03g55330 LOC_Os03g60920 LOC_Os03g51900 LOC_Os03g22350 More.. |
| Downstream Genes | LOC_Os10g18220 LOC_Os06g49140 LOC_Os05g01990 LOC_Os07g43980 LOC_Os09g19560 LOC_Os04g55260 LOC_Os04g42010 LOC_Os10g01540 LOC_Os06g12990 LOC_Os08g05880 LOC_Os12g42370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g25990.1 |
| Rice Genome Annotation | LOC_Os04g25990.1 |
| Ricechip | LOC_Os04g25990.1 |
| KEGG | osa:4335490 dosa:Os04t0326300-01 |
| Entrez-Gene | 4335490 |