RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g28060.1 View Network Show in Genome Browser |
| Other Names | Os04g0348100 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 16567700-16571047 Nucleotide Length: 852 |
| Protein-coding | LOC_Os04g28060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g72780 LOC_Os03g18840 LOC_Os02g46150 LOC_Os01g40250 LOC_Os02g39820 LOC_Os03g50120 LOC_Os01g42990 LOC_Os03g22880 LOC_Os03g01530 LOC_Os02g42550 LOC_Os02g44810 More.. |
| Downstream Genes | LOC_Os08g09350 LOC_Os12g19590 LOC_Os12g06910 LOC_Os08g15030 LOC_Os07g40750 LOC_Os08g10649 LOC_Os12g42150 LOC_Os04g36890 LOC_Os06g16290 LOC_Os04g53700 LOC_Os04g41300 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g28060.1 |
| Rice Genome Annotation | LOC_Os04g28060.1 |
| Ricechip | LOC_Os04g28060.1 |
| KEGG | osa:4335541 dosa:Os04t0348100-01 |
| Entrez-Gene | 4335541 |