RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os04g28420.1 View Network Show in Genome Browser
Other Names	Os04g0352400
Description	peptidyl-prolyl isomerase, putative, expressed
Gene Attributes	Chromosome: Chr4 CDS Coordinates (5'-3'): 16813848-16817974 Nucleotide Length: 1758
Protein-coding	LOC_Os04g28420

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g53280 LOC_Os02g55880 LOC_Os01g16190 LOC_Os03g63330 LOC_Os01g68710 LOC_Os01g70300 LOC_Os04g19740 LOC_Os03g55280 LOC_Os01g32080 LOC_Os02g34510 LOC_Os02g12800 More..
Downstream Genes	LOC_Os09g32526 LOC_Os07g20544 LOC_Os04g36890 LOC_Os05g30800 LOC_Os06g14190 LOC_Os06g04270 LOC_Os08g19850 LOC_Os11g30410 LOC_Os04g37690 LOC_Os08g36774 LOC_Os09g15770 More..

miRNA Regulations
miRNAs	osa-miR529b

Database Links
Gramene	LOC_Os04g28420.1
Rice Genome Annotation	LOC_Os04g28420.1
Ricechip	LOC_Os04g28420.1
KEGG	osa:4335556 dosa:Os04t0352400-01
Entrez-Gene	4335556