RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g30430.1 View Network Show in Genome Browser |
| Other Names | Os04g0372800 |
| Description | nuclear transport factor 2, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 18172145-18177125 Nucleotide Length: 1461 |
| Protein-coding | LOC_Os04g30430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g28810 LOC_Os02g27760 LOC_Os04g28180 LOC_Os03g18580 LOC_Os03g18570 LOC_Os01g67134 LOC_Os02g14059 LOC_Os03g31090 LOC_Os01g10820 LOC_Os01g25610 LOC_Os02g01560 More.. |
| Downstream Genes | LOC_Os12g03880 LOC_Os07g10720 LOC_Os11g04070 LOC_Os08g03640 LOC_Os06g23440 LOC_Os10g27174 LOC_Os12g03090 LOC_Os11g03400 LOC_Os06g35730 LOC_Os05g11710 LOC_Os07g18050 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2930 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g30430.1 |
| Rice Genome Annotation | LOC_Os04g30430.1 |
| Ricechip | LOC_Os04g30430.1 |
| KEGG | osa:4335600 dosa:Os04t0372800-01 |
| Entrez-Gene | 4335600 |