RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g30490.1 View Network Show in Genome Browser |
| Other Names | Os04g0373400 |
| Description | MATE efflux family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 18212826-18216756 Nucleotide Length: 1452 |
| Protein-coding | LOC_Os04g30490 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g52790 LOC_Os03g62200 LOC_Os01g65000 LOC_Os02g34580 LOC_Os01g61510 LOC_Os01g61550 LOC_Os03g53780 LOC_Os01g43710 LOC_Os02g40730 LOC_Os02g40710 LOC_Os01g42740 More.. |
| Downstream Genes | LOC_Os12g01420 LOC_Os05g39240 LOC_Os11g01410 LOC_Os08g18044 LOC_Os08g06250 LOC_Os12g09000 LOC_Os05g30890 LOC_Os04g43070 LOC_Os06g51480 LOC_Os04g58330 LOC_Os07g22720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g30490.1 |
| Rice Genome Annotation | LOC_Os04g30490.1 |
| Ricechip | LOC_Os04g30490.1 |
| KEGG | osa:4335602 dosa:Os04t0373400-01 |
| Entrez-Gene | 4335602 |