RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g30800.2 View Network Show in Genome Browser |
| Other Names | Os04g0376700 |
| Description | ER lumen protein retaining receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 18415188-18417589 Nucleotide Length: 648 |
| Protein-coding | LOC_Os04g30800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g17020 LOC_Os01g17430 LOC_Os03g34300 LOC_Os01g59790 LOC_Os02g22090 LOC_Os03g59740 LOC_Os01g16030 LOC_Os02g54990 LOC_Os02g12740 LOC_Os02g03540 LOC_Os03g60939 More.. |
| Downstream Genes | LOC_Os11g07280 LOC_Os05g41060 LOC_Os10g33770 LOC_Os07g12200 LOC_Os07g12170 LOC_Os04g59494 LOC_Os08g42020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g30800.2 |
| Rice Genome Annotation | LOC_Os04g30800.2 |
| Ricechip | LOC_Os04g30800.2 |
| KEGG | osa:4335613 dosa:Os04t0376700-00 |
| Entrez-Gene | 4335613 |