RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32030.1 View Network Show in Genome Browser |
| Other Names | Os04g0390100 |
| Description | heavy metal-associated domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19189122-19192392 Nucleotide Length: 1158 |
| Protein-coding | LOC_Os04g32030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019725 | cellular homeostasis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g47780 LOC_Os03g45920 LOC_Os01g18240 LOC_Os03g12250 LOC_Os03g12030 LOC_Os03g02240 LOC_Os01g25560 LOC_Os03g50030 LOC_Os01g11710 LOC_Os01g65780 LOC_Os02g08230 More.. |
| Downstream Genes | LOC_Os07g42410 LOC_Os05g20050 LOC_Os12g32620 LOC_Os08g06380 LOC_Os12g25690 LOC_Os09g36860 LOC_Os12g07160 LOC_Os12g34524 LOC_Os05g32500 LOC_Os11g30360 LOC_Os05g03174 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32030.1 |
| Rice Genome Annotation | LOC_Os04g32030.1 |
| Ricechip | LOC_Os04g32030.1 |
| KEGG | osa:9272556 dosa:Os04t0390100-01 |
| Entrez-Gene | 9272556 |