RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32150.1 View Network Show in Genome Browser |
| Other Names | Os04g0391900 |
| Description | amidohydrolase family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19283299-19286883 Nucleotide Length: 744 |
| Protein-coding | LOC_Os04g32150 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g10380 LOC_Os03g51610 LOC_Os03g14400 |
| Downstream Genes | LOC_Os10g31820 LOC_Os08g16130 LOC_Os12g29760 LOC_Os10g08474 LOC_Os10g08319 |
| Pathways | |
|---|---|
| Metacyc Pathways | TRYPTOPHAN-DEGRADATION-1 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32150.1 |
| Rice Genome Annotation | LOC_Os04g32150.1 |
| Ricechip | LOC_Os04g32150.1 |
| KEGG | osa:4335683 dosa:Os04t0391900-01 |
| Entrez-Gene | 4335683 |