RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32340.1 View Network Show in Genome Browser |
| Other Names | Os04g0394300 |
| Description | RNA-binding motif protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19383372-19391637 Nucleotide Length: 2712 |
| Protein-coding | LOC_Os04g32340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61110 LOC_Os03g21140 LOC_Os03g05690 |
| Downstream Genes | LOC_Os06g07350 LOC_Os07g18050 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR6248 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32340.1 |
| Rice Genome Annotation | LOC_Os04g32340.1 |
| Ricechip | LOC_Os04g32340.1 |
| KEGG | osa:4335690 dosa:Os04t0394300-01 |
| Entrez-Gene | 4335690 |