RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32550.1 View Network Show in Genome Browser |
| Other Names | Os04g0397000 |
| Description | defender against cell death 1, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19598193-19600909 Nucleotide Length: 345 |
| Protein-coding | LOC_Os04g32550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g30890 LOC_Os03g51160 LOC_Os01g64690 LOC_Os01g68324 LOC_Os03g11440 LOC_Os02g39830 LOC_Os01g19470 LOC_Os03g60700 LOC_Os03g08280 LOC_Os03g27450 LOC_Os02g11830 More.. |
| Downstream Genes | LOC_Os05g23600 LOC_Os07g10830 LOC_Os04g32950 LOC_Os04g57890 LOC_Os05g06450 LOC_Os09g17840 LOC_Os09g17830 LOC_Os07g31370 LOC_Os07g42820 LOC_Os06g16260 LOC_Os11g07280 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32550.1 |
| Rice Genome Annotation | LOC_Os04g32550.1 |
| Ricechip | LOC_Os04g32550.1 |
| KEGG | osa:4335701 dosa:Os04t0397000-01 |
| Entrez-Gene | 4335701 |