RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g32950.1 View Network Show in Genome Browser |
| Other Names | Os04g0402100 |
| Description | calreticulin precursor protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 19913228-19915692 Nucleotide Length: 1614 |
| Protein-coding | LOC_Os04g32950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g32550 LOC_Os03g63110 LOC_Os02g21650 LOC_Os02g02410 LOC_Os02g48110 LOC_Os03g14450 LOC_Os01g64490 LOC_Os02g08180 LOC_Os01g38510 LOC_Os02g21080 LOC_Os03g53800 More.. |
| Downstream Genes | LOC_Os11g09280 LOC_Os04g52900 LOC_Os05g06440 LOC_Os10g08550 LOC_Os06g04510 LOC_Os07g19070 LOC_Os06g05740 LOC_Os06g39260 LOC_Os08g17680 LOC_Os10g38660 LOC_Os06g50300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g32950.1 |
| Rice Genome Annotation | LOC_Os04g32950.1 |
| Ricechip | LOC_Os04g32950.1 |
| KEGG | osa:4335732 dosa:Os04t0402100-01 |
| Entrez-Gene | 4335732 |