RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33060.1 View Network Show in Genome Browser |
| Other Names | Os04g0403500 |
| Description | NAD dependent epimerase/dehydratase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20015750-20019634 Nucleotide Length: 939 |
| Protein-coding | LOC_Os04g33060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48000 |
| Downstream Genes | LOC_Os11g25030 LOC_Os11g24450 LOC_Os10g41450 LOC_Os07g07020 LOC_Os05g22970 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-2582 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33060.1 |
| Rice Genome Annotation | LOC_Os04g33060.1 |
| Ricechip | LOC_Os04g33060.1 |
| KEGG | osa:4335739 dosa:Os04t0403500-01 |
| Entrez-Gene | 4335739 |