RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33220.1 View Network Show in Genome Browser |
| Other Names | Os04g0405100 |
| Description | SAM domain family protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20099031-20103020 Nucleotide Length: 801 |
| Protein-coding | LOC_Os04g33220 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33210 LOC_Os03g63320 |
| Downstream Genes | LOC_Os04g55120 LOC_Os12g32992 LOC_Os09g26760 LOC_Os04g39090 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33220.1 |
| Rice Genome Annotation | LOC_Os04g33220.1 |
| Ricechip | LOC_Os04g33220.1 |
| KEGG | osa:4335748 dosa:Os04t0405100-01 |
| Entrez-Gene | 4335748 |