RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33300.1 View Network Show in Genome Browser |
| Other Names | Os04g0405800 |
| Description | amino acid kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20138880-20141866 Nucleotide Length: 906 |
| Protein-coding | LOC_Os04g33300 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g24612 LOC_Os01g63830 LOC_Os03g08440 LOC_Os03g38230 LOC_Os01g55360 LOC_Os02g03460 LOC_Os03g31690 LOC_Os03g63330 LOC_Os01g52400 LOC_Os01g54900 LOC_Os02g10260 More.. |
| Downstream Genes | LOC_Os04g41300 LOC_Os07g38300 LOC_Os12g35630 LOC_Os08g25290 LOC_Os10g17990 LOC_Os07g42450 LOC_Os07g41680 LOC_Os06g07120 LOC_Os05g38150 LOC_Os04g46460 LOC_Os08g12840 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00240 rn01100 |
| Metacyc Pathways | PWY0-162 P1-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33300.1 |
| Rice Genome Annotation | LOC_Os04g33300.1 |
| Ricechip | LOC_Os04g33300.1 |
| KEGG | osa:4335753 dosa:Os04t0405800-01 |
| Entrez-Gene | 4335753 |