RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33460.1 View Network Show in Genome Browser |
| Other Names | Os04g0409200 |
| Description | 1,4-alpha-glucan-branching enzyme 2, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20239790-20243460 Nucleotide Length: 1128 |
| Protein-coding | LOC_Os04g33460 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52460 LOC_Os01g44220 LOC_Os01g63270 LOC_Os03g55090 LOC_Os02g51070 LOC_Os02g56320 LOC_Os01g52250 LOC_Os02g32660 LOC_Os02g52710 |
| Downstream Genes | LOC_Os06g04200 LOC_Os07g13980 LOC_Os09g12660 LOC_Os08g25734 LOC_Os05g50380 LOC_Os07g22930 LOC_Os06g12450 LOC_Os06g06560 LOC_Os10g30156 LOC_Os05g45720 LOC_Os04g53310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33460.1 |
| Rice Genome Annotation | LOC_Os04g33460.1 |
| Ricechip | LOC_Os04g33460.1 |
| KEGG | osa:4335763 dosa:Os04t0409200-00 |
| Entrez-Gene | 4335763 |