RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33570.1 View Network Show in Genome Browser |
| Other Names | Os04g0411400 |
| Description | RCN4 Centroradialis-like1 homologous to TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20319029-20321514 Nucleotide Length: 522 |
| Protein-coding | LOC_Os04g33570 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008289 | lipid binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51080 LOC_Os04g01600 LOC_Os03g13300 LOC_Os01g71300 LOC_Os01g62870 LOC_Os01g12800 LOC_Os03g17700 LOC_Os01g32660 LOC_Os02g06640 LOC_Os03g04240 LOC_Os03g02680 More.. |
| Downstream Genes | LOC_Os05g39250 LOC_Os08g36320 LOC_Os04g37460 LOC_Os05g25310 LOC_Os11g17610 LOC_Os10g37660 LOC_Os04g37500 LOC_Os06g06090 LOC_Os10g11140 LOC_Os06g46770 LOC_Os05g42424 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33570.1 |
| Rice Genome Annotation | LOC_Os04g33570.1 |
| Ricechip | LOC_Os04g33570.1 |
| KEGG | osa:4335774 dosa:Os04t0411400-01 |
| Entrez-Gene | 4335774 |