RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33720.1 View Network Show in Genome Browser |
| Other Names | Os04g0413200 |
| Description | glycosyl hydrolases, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20412315-20415242 Nucleotide Length: 1761 |
| Protein-coding | LOC_Os04g33720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g40550 LOC_Os01g63220 |
| Downstream Genes | LOC_Os07g33220 LOC_Os11g08090 LOC_Os09g34970 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR812o-3p osa-miR812a osa-miR812b osa-miR812c osa-miR812d osa-miR812e osa-miR812k osa-miR812l osa-miR812m |
| Pathways | |
|---|---|
| KEGG Pathways | rn00052 rn01100 rn00500 |
| Metacyc Pathways | GLYCOCAT-PWY PWY-842 SUCUTIL-PWY PWY-621 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33720.1 |
| Rice Genome Annotation | LOC_Os04g33720.1 |
| Ricechip | LOC_Os04g33720.1 |
| KEGG | osa:4335789 dosa:Os04t0413200-01 |
| Entrez-Gene | 4335789 |