RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33810.1 View Network Show in Genome Browser |
| Other Names | Os04g0414400,Os04g0414300 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20484158-20485720 Nucleotide Length: 414 |
| Protein-coding | LOC_Os04g33810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g03140 LOC_Os03g58720 LOC_Os03g60930 LOC_Os03g22380 LOC_Os02g16860 LOC_Os02g03040 |
| Downstream Genes | LOC_Os11g45590 LOC_Os08g37700 LOC_Os11g41820 LOC_Os06g48310 LOC_Os05g30140 LOC_Os05g02400 LOC_Os12g01010 LOC_Os06g13999 LOC_Os06g13839 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33810.1 |
| Rice Genome Annotation | LOC_Os04g33810.1 |
| Ricechip | LOC_Os04g33810.1 |
| KEGG | dosa:Os04t0414300-00 |
| Entrez-Gene | 9266763 |