RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33900.1 View Network Show in Genome Browser |
| Other Names | Os04g0415600 |
| Description | ctr copper transporter family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20534071-20534774 Nucleotide Length: 555 |
| Protein-coding | LOC_Os04g33900 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g47970 LOC_Os01g70100 LOC_Os01g64660 |
| Downstream Genes | LOC_Os09g33450 LOC_Os08g42620 LOC_Os08g42370 LOC_Os06g03540 LOC_Os07g10600 LOC_Os06g03560 LOC_Os04g48410 LOC_Os06g03700 LOC_Os08g18044 LOC_Os12g04990 LOC_Os11g04980 More.. |
| Reference | |
|---|---|
| PubMed | 21510855 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33900.1 |
| Rice Genome Annotation | LOC_Os04g33900.1 |
| Ricechip | LOC_Os04g33900.1 |
| KEGG | osa:9269583 dosa:Os04t0415600-00 |
| Entrez-Gene | 9269583 |