RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os04g33970.1 View Network Show in Genome Browser |
| Other Names | Os04g0416400 |
| Description | 2-Cys peroxiredoxin BAS1, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr4 CDS Coordinates (5'-3'): 20559966-20564907 Nucleotide Length: 366 |
| Protein-coding | LOC_Os04g33970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g14950 LOC_Os01g24060 |
| Downstream Genes | LOC_Os05g06350 LOC_Os06g03676 |
| Database Links | |
|---|---|
| Gramene | LOC_Os04g33970.1 |
| Rice Genome Annotation | LOC_Os04g33970.1 |
| Ricechip | LOC_Os04g33970.1 |
| KEGG | osa:4335809 dosa:Os04t0416400-01 |
| Entrez-Gene | 4335809 |